com.xinapse.multisliceimage.roi
Class ContourWorker

java.lang.Object
  javax.swing.SwingWorker<ExitStatus,java.lang.Integer>
      com.xinapse.util.MonitorWorker
          com.xinapse.multisliceimage.roi.ContourWorker

All Implemented Interfaces:

java.lang.Runnable, java.util.concurrent.Future<ExitStatus>, java.util.concurrent.RunnableFuture<ExitStatus>

public class ContourWorker
extends MonitorWorker

A MonitorWorker for performing edge detection and contouring from a seed point.

Nested Class Summary

Nested classes/interfaces inherited from class javax.swing.SwingWorker

javax.swing.SwingWorker.StateValue

Field Summary

Fields inherited from class com.xinapse.util.MonitorWorker

errorMessage, indeterminateMonitor, monitor

Constructor Summary

ContourWorker(javax.vecmath.Point3i seedPoint, LoadableImage image, ComplexMode complexMode, ContourMode contourMode, double level, IntensityRelation intensityRelation, boolean threeD, int plusMinusSlices, byte userColour, boolean pixelSnap, boolean snapCentre, CanAddROIToFrame canAddROIToFrame, boolean preview)
Instantiates a new ContourWorker that will perform contouring from the supplied seed pixel.

Method Summary

ExitStatus	doInBackground() Runs this ContourWorker in the background.
void	done() Overrides the done() method.
javax.vecmath.Point3i	getSeedPoint() Returns the seed point from which contouring was initiated.

Methods inherited from class com.xinapse.util.MonitorWorker

checkCancelled, checkCancelled, checkCancelled, checkCancelled, getComponent, getProgName, setAction, setAction

Methods inherited from class javax.swing.SwingWorker

addPropertyChangeListener, cancel, execute, firePropertyChange, get, get, getProgress, getPropertyChangeSupport, getState, isCancelled, isDone, process, publish, removePropertyChangeListener, run, setProgress

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

ContourWorker

public ContourWorker(javax.vecmath.Point3i seedPoint,
                     LoadableImage image,
                     ComplexMode complexMode,
                     ContourMode contourMode,
                     double level,
                     IntensityRelation intensityRelation,
                     boolean threeD,
                     int plusMinusSlices,
                     byte userColour,
                     boolean pixelSnap,
                     boolean snapCentre,
                     CanAddROIToFrame canAddROIToFrame,
                     boolean preview)
              throws InvalidImageException

Instantiates a new ContourWorker that will perform contouring from the supplied seed pixel.

Parameters:

seedPoint - the coordinates of the pixel that will be used as the seed point.

image - the image on which contouring will be performed.

complexMode - the ComplexMode the contouring. For PixelDataType.COMPLEX images, the values contoured will depend on this setting.

contourMode - the mode by which the edge is located. before contouring around the edge. If false, then contouring performed directly from the seed point.

threeD - whether to create contours in 3-D.

plusMinusSlices - the maximum number of slices either side of the seed slice when propagating in 3-D.

userColour - the user-specified colour for the created ContourROIs.

pixelSnap - whether to snap the contour to the nearest pixel corners/centres.

snapCentre - if true, snap to the centre of pixels; if false snap to the corners.

canAddROIToFrame - resulting ROIs will be loaded to this CanAddROIToFrame by this ContourThread.

preview - true if the ROI(s) generated are to be previewed only, rather than added.

Throws:

InvalidImageException

Method Detail

getSeedPoint

public javax.vecmath.Point3i getSeedPoint()

Returns the seed point from which contouring was initiated.

Returns:

the seed point from which contouring was initiated.

doInBackground

public ExitStatus doInBackground()

Runs this ContourWorker in the background.

Specified by:

doInBackground in class MonitorWorker

Returns:

the ExitStatus indicating whether the processing was successful, and if not why not.

done

public void done()

Description copied from class: MonitorWorker

Overrides the done() method. Closes the ProgressMonitor or IndeterminateProgressMonitor.

Overrides:

done in class MonitorWorker