com.xinapse.multisliceimage.roi
Class IrregularROIInProgress

java.lang.Object
  com.xinapse.multisliceimage.roi.ROI
      com.xinapse.multisliceimage.roi.IrregularROI
          com.xinapse.multisliceimage.roi.IrregularROIInProgress

All Implemented Interfaces:

EditableOutlineROI, RotatableROI, StretchableROI, java.lang.Cloneable

public class IrregularROIInProgress
extends IrregularROI
implements java.lang.Cloneable

A Class representing an IrregularROI being drawn on an image. When being drawn, an IrregularROI looks like a CurvedLineROI.

Field Summary

Fields inherited from class com.xinapse.multisliceimage.roi.IrregularROI

nPoints, POINTSTOKEN, xpts, ypts

Fields inherited from class com.xinapse.multisliceimage.roi.ROI

handles, PREFERENCES_NODE_NAME, XTOKEN, YTOKEN

Constructor Summary

IrregularROIInProgress(double[] x, double[] y, byte userColour)
Creates a new IrregularROIInProgress with the specified shape in mm coordinates.

Method Summary

void	appendVertex(double x, double y)
void	appendVertex(java.awt.geom.Point2D pt)
IrregularROIInProgress	clone() Returns a clone of this ROI.
boolean	draw(java.awt.Graphics g, java.awt.Rectangle visibleRectangle, int imageDrawCols, int imageDrawRows, int xOffset, int yOffset, int nCols, int nRows, float pixelXSize, float pixelYSize, boolean drawAnnotation) Draws this ROI if it needs to be be drawn on screen.
void	insertVertex(double x, double y)
void	insertVertex(java.awt.geom.Point2D pt)
void	removeFirstVertex()
void	removeLastVertex()

Methods inherited from class com.xinapse.multisliceimage.roi.IrregularROI

closestPoints, contains, deleteVertex, dilate, drawInOrthoView, equals, erasePoints, flipHorizontal, flipVertical, getButtonIcon, getCentre, getCopy, getCreateInteractionType, getDescription, getFeret, getFollowingHandle, getName, getNPoints, getPerimeter, getPrecedingHandle, getTheta, getVertex, getVertexHandles, getVertices, hashCode, insertTwoVertices, intersects, join, makeConvex, move, move, moveVertex, selfIntersects, set, setTheta, setVertex, setVertices, setVertices, setVertices, setVertices, toString

Methods inherited from class com.xinapse.multisliceimage.roi.ROI

add, add, addMorphological, clearDeletionHistory, clearStats, dilate, exclusiveOr, getAnnotation, getBoundingRectangle, getBoundingRectangle, getCachedStatistics, getClasses, getColor, getDisplayedBounds2D, getDisplayedBounds2D, getDisplayedRoiArea, getFeret, getHandles, getHandleUnderPoint, getImageSource, getPixelValue, getROIs, getROIs, getROIs, getSlice, getState, getStats, getStats, getStats, getTextColor, getTextFontSize, getUserColour, intersect, isDeleted, isEditable, isReloaded, isSelected, join, main, markDeleted, mmPosToPix, moveROIs, pixPosToMm, printStats, selectDeselect, setAnnotation, setCreationHistory, setSlice, setState, setTextColor, setTextSize, setUserColour, subtract, subtract, write, write

Methods inherited from class java.lang.Object

finalize, getClass, notify, notifyAll, wait, wait, wait

Methods inherited from interface com.xinapse.multisliceimage.roi.StretchableROI

getDisplayedBounds2D

Constructor Detail

IrregularROIInProgress

public IrregularROIInProgress(double[] x,
                              double[] y,
                              byte userColour)
                       throws ROIException

Creates a new IrregularROIInProgress with the specified shape in mm coordinates.

Parameters:

x - an array of x-coordinates for the points forming the outline.

y - an array of y-coordinates for the points forming the outline.

Throws:

ROIException - if the ROI cannot be created as specified.

Method Detail

appendVertex

public void appendVertex(java.awt.geom.Point2D pt)

appendVertex

public void appendVertex(double x,
                         double y)

insertVertex

public void insertVertex(java.awt.geom.Point2D pt)

insertVertex

public void insertVertex(double x,
                         double y)

removeLastVertex

public void removeLastVertex()

removeFirstVertex

public void removeFirstVertex()

draw

public boolean draw(java.awt.Graphics g,
                    java.awt.Rectangle visibleRectangle,
                    int imageDrawCols,
                    int imageDrawRows,
                    int xOffset,
                    int yOffset,
                    int nCols,
                    int nRows,
                    float pixelXSize,
                    float pixelYSize,
                    boolean drawAnnotation)

Description copied from class: ROI

Draws this ROI if it needs to be be drawn on screen.

Overrides:

draw in class IrregularROI

Parameters:

g - the graphics context for the drawing operation.

visibleRectangle - the part of the image that can be seen on-screen.

imageDrawCols - width of the area in which this portion of the image is to be drawn.

imageDrawRows - height of the area in which this portion of the image is to be drawn.

xOffset - a horizontal offset for drawing operations.

yOffset - a vertical offset for drawing operations.

nCols - the number of columns in the image on which this ROI is defined.

nRows - the number of rows in the image on which this ROI is defined.

pixelXSize - pixel width for the image on which this ROI is defined.

pixelYSize - pixel height for the image on which this ROI is defined.

drawAnnotation - a flag to indicate whether annotation should be drawn.

Returns:

true if the ROI is visible and been drawn on screen; false otherwise.

clone

public IrregularROIInProgress clone()

Description copied from class: ROI

Returns a clone of this ROI. The copy will be identical in shape and annotation as the original ROI, and with a history identical to the cloned ROI.

Overrides:

clone in class IrregularROI

Returns:

a clone of this ROI, cast to an Object.